docs: move api and cli docs routes to reference/ (#14241)

docs/admin/automation.md

@@ -4,8 +4,8 @@ All actions possible through the Coder dashboard can also be automated as it
 utilizes the same public REST API. There are several ways to extend/automate
 Coder:
 
-- [CLI](../cli.md)
-- [REST API](../api/)
+- [CLI](../reference/cli/README.md)
+- [REST API](../reference/api/README.md)
 - [Coder SDK](https://pkg.go.dev/github.com/coder/coder/v2/codersdk)
 
 ## Quickstart
@@ -32,9 +32,10 @@ curl https://coder.example.com/api/v2/workspaces?q=owner:me \
 
 ## Documentation
 
-We publish an [API reference](../api/index.md) in our documentation. You can
-also enable a [Swagger endpoint](../cli/server.md#--swagger-enable) on your
-Coder deployment.
+We publish an [API reference](../reference/api/README.md) in our documentation.
+You can also enable a
+[Swagger endpoint](../reference/cli/server.md#--swagger-enable) on your Coder
+deployment.
 
 ## Use cases
 
@@ -52,8 +53,8 @@ payloads, we recommend checking the CLI and API documentation.
 Workspace agents have a special token that can send logs, metrics, and workspace
 activity.
 
-- [Custom workspace logs](../api/agents.md#patch-workspace-agent-logs): Expose
-  messages prior to the Coder init script running (e.g. pulling image, VM
+- [Custom workspace logs](../reference/api/agents.md#patch-workspace-agent-logs):
+  Expose messages prior to the Coder init script running (e.g. pulling image, VM
   starting, restoring snapshot).
   [coder-logstream-kube](https://github.com/coder/coder-logstream-kube) uses
   this to show Kubernetes events, such as image pulls or ResourceQuota
@@ -73,7 +74,7 @@ activity.
   }"
   ```
 
-- [Manually send workspace activity](../api/agents.md#submit-workspace-agent-stats):
+- [Manually send workspace activity](../reference/api/agents.md#submit-workspace-agent-stats):
   Keep a workspace "active," even if there is not an open connection (e.g. for a
   long-running machine learning job).